Category Archives: leginon

phpMyAdmin migrate database

I’m making dockers for all my web applications. And most of my web applications are hooked up with databases. And where you have a database, you have phpMyAdmin. Anyway. I have this computer A with a very extensive database that … Continue reading

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A leginon docker on CentOS 7 Part II: centos7AutoInstallation.py

On the previous post, we prepared a basic LAMP docker to hold a leginon installation.  I assume now you downloaded the installer for CentOS 7 and copied it to the docker via ssh or shared folder. We can simply run … Continue reading

Posted in bits, centos, containers, docker, EM, filesystems, leginon, linux, modules, mysql, yum | 1 Comment

A docker macvlan on CentOS 7

I want to dockerize my services (not only leginon) so I need to find out an effective way to integrate them onto our intranet. That is proven to be a little bit complex, since I have partial control of our … Continue reading

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A leginon docker on CentOS 7 Part I: docker and database server install

Previously we we made a leginon CentOS 6 container on CentOS 7. Now the LXC containers are somehow more robust than a docker, but less popular and versatile. Therefore the need to make a docker instead. I start by cloning … Continue reading

Posted in bash, centos, containers, docker, EM, leginon, linux, python, yum | 2 Comments

Windows XP ignoring the hosts file

A little bit of context is needed. We have a subnet with 3 computers that need to connect to each other. It’s a Windows XP, a Windows 7 and a Centos 6. We can’t get rid of the OS, since … Continue reading

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A leginon CentOS 6 container on CentOS 7

Continuing with our cooking recipes, I’m going to install leginon on a CentOS 6 container running on CentOS 7. We start creating a CentOS 6 container: lxc-create -n centos6 -t download — -d centos -r 6 -a i386 lxc-start -n … Continue reading

Posted in bits, centos, containers, EM, hardware, leginon, linux, mysql, python | 1 Comment

Leginon installation routine

To cover it all, I think I miss to speak about Leginon. Leginon is a system designed for automated collection of images from a transmission electron microscope. Yes, I quote. Now the truth. It’s ideal to collect automatically images from a microscope, … Continue reading

Posted in bits, EM, leginon, linux, mysql, python, windows | 1 Comment